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SRX26407815: Transcriptome of mono-associated gnotobiotic cabbage kimchi
1 ILLUMINA (Illumina NovaSeq 6000) run: 16.5M spots, 5G bases, 1.5Gb downloads

Design: Transcriptome of a single lactic acid bacterial strain
Submitted by: World Institute of Kimchi
Study: Transcriptomic Analysis of Fecal Kimchi-Derived Lactic Acid Bacteria Under Varying Environmental Conditions
show Abstracthide Abstract
This dataset comprises transcriptomic raw sequence data from three fecal kimchi-derived lactic acid bacteria species, Lactococcus lactis subsp. lactis CBA3648, Latilactobacillus sakei subsp. sakei CBA3649, and Leuconostoc mesenteroides subsp. mesenteroides CBA3650, under varying conditions. The bacteria were introduced into germ-free kimchi (consisting of Brassica rapa subsp. pekinensis and Raphanus sativus L.), germ-free mice (jejunal-ileum, cecum, and large intestine), and basal media at different temperatures (low and high). Transcriptomic sequencing was carried out using the Illumina NovaSeq 6000 platform.
Sample: B 2-1
SAMN44270193 • SRS22927860 • All experiments • All runs
Library:
Name: B_2_1
Instrument: Illumina NovaSeq 6000
Strategy: RNA-Seq
Source: TRANSCRIPTOMIC
Selection: RANDOM
Layout: PAIRED
Runs: 1 run, 16.5M spots, 5G bases, 1.5Gb
Run# of Spots# of BasesSizePublished
SRR3102066516,531,6095G1.5Gb2025-01-06

ID:
35666667

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